SCAF4 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000009536 T42289_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023967 RRM 480 546

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SCAF4 Anolis carolinensis ENSACAG00000002569 N 0.746
SCAF4 Danio rerio ENSDARG00000018854 N 0.791
si:dkey-50p8.3 Danio rerio ENSDARG00000077093 N 0.806
ENSGACG00000020580 Gasterosteus aculeatus ENSGACG00000020580 N 0.776
ENSORLG00000004384 Oryzias latipes ENSORLG00000004384 N 0.821
ENSTRUG00000007792 Takifugu rubripes ENSTRUG00000007792 N 0.836
ENSTNIG00000009945 Tetraodon nigroviridis ENSTNIG00000009945 N 0.821