CELF3 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000012064 T42327_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000030511 RRM 1 33
ENSTRUP00000030511 RRM 52 120
ENSTRUP00000030511 RRM 351 421
ENSTRUP00000030512 RRM 1 33
ENSTRUP00000030512 RRM 52 120
ENSTRUP00000030512 RRM 275 345
ENSTRUP00000030513 RRM 49 117
ENSTRUP00000030513 RRM 334 404
ENSTRUP00000030514 RRM 1 30
ENSTRUP00000030514 RRM 58 126
ENSTRUP00000030514 RRM 317 355

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh3_pg.105__14 Postia placenta fgenesh3_pg.105__14 N 0.000
fgenesh3_pg.326__2 Postia placenta fgenesh3_pg.326__2 N 0.000
fgenesh3_pg.348__2 Postia placenta fgenesh3_pg.348__2 N 0.000
fgenesh3_pg.359__1 Postia placenta fgenesh3_pg.359__1 N 0.000
fgenesh3_pg.44__55 Postia placenta fgenesh3_pg.44__55 N 0.000
fgenesh3_pg.49__68 Postia placenta fgenesh3_pg.49__68 N 0.000
fgenesh3_pg.51__8 Postia placenta fgenesh3_pg.51__8 N 0.000
fgenesh3_pg.53__89 Postia placenta fgenesh3_pg.53__89 N 0.000
fgenesh3_pg.63__75 Postia placenta fgenesh3_pg.63__75 N 0.000
fgenesh3_pg.647__1 Postia placenta fgenesh3_pg.647__1 N 0.000
fgenesh3_pg.66__60 Postia placenta fgenesh3_pg.66__60 N 0.000
fgenesh3_pg.7__151 Postia placenta fgenesh3_pg.7__151 N 0.000
fgenesh3_pg.77__33 Postia placenta fgenesh3_pg.77__33 N 0.000
fgenesh3_pg.89__23 Postia placenta fgenesh3_pg.89__23 N 0.000
fgenesh3_pg.900__1 Postia placenta fgenesh3_pg.900__1 N 0.000
fgenesh3_pg.9__147 Postia placenta fgenesh3_pg.9__147 N 0.000
fgenesh3_pg.2__92 Postia placenta fgenesh3_pg.2__92 N 0.000
fgenesh3_pg.282__8 Postia placenta fgenesh3_pg.282__8 N 0.000
fgenesh3_pg.266__9 Postia placenta fgenesh3_pg.266__9 N 0.000
fgenesh3_pg.10__6 Postia placenta fgenesh3_pg.10__6 N 0.000
fgenesh3_pg.107__20 Postia placenta fgenesh3_pg.107__20 N 0.000
fgenesh3_pg.11__132 Postia placenta fgenesh3_pg.11__132 N 0.000
fgenesh3_pg.116__47 Postia placenta fgenesh3_pg.116__47 N 0.000
fgenesh3_pg.11__80 Postia placenta fgenesh3_pg.11__80 N 0.000
fgenesh3_pg.121__36 Postia placenta fgenesh3_pg.121__36 N 0.000
fgenesh3_pg.136__2 Postia placenta fgenesh3_pg.136__2 N 0.000
fgenesh3_pg.150__7 Postia placenta fgenesh3_pg.150__7 N 0.000
fgenesh3_pg.178__10 Postia placenta fgenesh3_pg.178__10 N 0.000
fgenesh3_pg.19__17 Postia placenta fgenesh3_pg.19__17 N 0.000
fgenesh3_pg.19__42 Postia placenta fgenesh3_pg.19__42 N 0.000
fgenesh3_pg.194__2 Postia placenta fgenesh3_pg.194__2 N 0.000
fgenesh3_pg.202__23 Postia placenta fgenesh3_pg.202__23 N 0.000
fgenesh3_pg.223__10 Postia placenta fgenesh3_pg.223__10 N 0.000
fgenesh3_pg.264__1 Postia placenta fgenesh3_pg.264__1 N 0.000
fgenesh3_pg.9__2 Postia placenta fgenesh3_pg.9__2 N 0.000