CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GJ12844
(
Drosophila virilis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0200079
T44039_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0227261
RRM
33
96
NKAHTEEDFREAFAPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEQMNGKTIGKTDR
FBpp0227261
RRM
124
186
FIVIPKTATEDDIRDEFAQWGEVENVTIVREKNNGSPKGFGYVRFTKFYYAAVAFENCSAKYK
FBpp0227261
RRM
271
334
VSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNEAVVVYDNPEAAIYAKDKLHGLEYPMGERI
FBpp0227261
RRM
386
445
LSANLPHSILKNIFSCWKGLIDVYLLPNKNCGYVKYSERESAQKAIGVLNGAEICGTKIK
Links
Other
RRM
family RBPs
Other
Drosophila virilis
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgeneshMC_pg.5_#_924
Mucor circinelloides
fgeneshMC_pg.5_#_924
N
0.000