CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PKH_111950
(
Plasmodium knowlesi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PKH_111950
T47455_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PKH_111950
RRM
41
100
NYILHRMFYEFAEDIIKVKLCKEKNSQRHSYAFIEFTNYDMAKYCFDNLNGKWIPGRIHR
PKH_111950
RRM
133
204
IYVGGLPKGTTKEEIETLFSQFYSSICFVKMIKNVQKNQNTIYCFIHFFNYDECIKALKEMDGYDFRGCKIK
Links
Other
RRM
family RBPs
Other
Plasmodium knowlesi
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PBANKA_112820
Plasmodium berghei
PBANKA_112820
N
0.795
PCHAS_112770
Plasmodium chabaudi
PCHAS_112770
N
0.788
PFF1425w
Plasmodium falciparum
PFF1425w
N
0.720
PVX_114570
Plasmodium vivax
PVX_114570
N
0.871
PY04169
Plasmodium yoelii
PY04169
N
0.795