CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
estExt_Genewise1Plus.C_180344
(
Neurospora tetrasperma
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
estExt_Genewise1Plus.C_180344
T51405_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_180344
RRM
35
105
VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIR
Links
Other
RRM
family RBPs
Other
Neurospora tetrasperma
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CAGL0J01914g
Candida glabrata
CAGL0J01914g
N
0.000
KLTH0F13442g
Kluyveromyces thermotolerans
KLTH0F13442g
N
0.000
SAKL0F04400g
Lachancea kluyveri
SAKL0F04400g
N
0.704
11273_YIR005W
Saccharomyces bayanus
11273_YIR005W
N
0.000
IST3
Saccharomyces cerevisiae
YIR005W
N
0.000
Skud_Contig843.2
Saccharomyces kudriavzevii
Skud_Contig843.2
N
0.000
11177_YIR005W
Saccharomyces mikatae
11177_YIR005W
N
0.000
A7TTU8_VANPO
Vanderwaltozyma polyspora
A7TTU8_VANPO
N
0.000