CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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fgeneshMC_pg.5_#_924
(
Mucor circinelloides
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
fgeneshMC_pg.5_#_924
T52433_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshMC_pg.5_#_924
RRM
30
107
LFVRGLPFEATSKDLEDFFGEIGPIRKCFVVTDRSVPPVEGQAPKNKGFGYVHYALEEDAQSAIAKLKNVKFQGRKLK
fgeneshMC_pg.5_#_924
RRM
155
225
LIVRNLPWKYREADLRTLFEKHGKVHDVKLPRKYEGGPLRGFAFIQFEKVDEAKAAMEAINATEHHGRTIA
fgeneshMC_pg.5_#_924
RRM
346
412
LFIRNLLFESTEEDLKQLFKQWGPVVYAKITRDPVTKLSRGTGFVCMRKKEDVDTILEAAETLRALS
fgeneshMC_pg.5_#_924
RRM
595
648
KQAKIIRSKDRIDTATNELRSKGYGFLEFNTHSHALASLRYLNNNPDIFDGKRL
Links
Other
RRM
family RBPs
Other
Mucor circinelloides
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RO3G_04536
Rhizopus oryzae
RO3G_04536
N
0.812