PredSwiss_ASS2010_2397.2 (Pneumocystis carinii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PredSwiss_ASS2010_2397.2 T54635_0.6 Pneumocystis Genome Project (2010-Oct-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_ASS2010_2397.2 RRM 33 107

Links

Other RRM family RBPs
Other Pneumocystis carinii RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.707
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.747
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.747
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.707
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.000
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.773
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.747
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.747
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.747
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.733
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.760
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.760