CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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rpb-7
(
Caenorhabditis elegans
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
Y54E10BR.6
T60798_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y54E10BR.6
S1
101
184
RPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDMEFDPNSEKPCYKTNDEANVIRNDDEIRVKLIGTRVDANDIFAIG
Links
Other
S1
family RBPs
Other
Caenorhabditis elegans
RBPs
56 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GIS2
Candida albicans
orf19.3182
N
0.000
Cd36_51760
Candida dubliniensis
Cd36_51760
N
0.000
PGUG_03386
Candida guilliermondii
PGUG_03386
N
0.000
CLUG_03387
Candida lusitaniae
CLUG_03387
N
0.000
CPAG_03337
Candida parapsilosis
CPAG_03337
N
0.000
DEHA0E12298g
Debaryomyces hansenii
DEHA0E12298g
N
0.000