CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSVIVG00029460001
(
Vitis vinifera
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
GSVIVG00029460001
T62218_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSVIVT00029460001
YTH
471
561
LLFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEILNIFKNY
Links
Other
YTH
family RBPs
Other
Vitis vinifera
RBPs
186 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
170151
Helobdella robusta
170151
N
0.000
171304
Helobdella robusta
171304
N
0.000
173198
Helobdella robusta
173198
N
0.000
180025
Helobdella robusta
180025
N
0.000
fgenesh3_pg.112__20
Postia placenta
fgenesh3_pg.112__20
N
0.000