CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP007912
(
Anopheles gambiae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
AGAP007912
T18076_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP007912-PA
KH
145
194
FVKRRSRLIGPNGCTLKSLELLTNCYVLVQGATVSAIGPYKGLQCVRKVV
Links
Other
KH
family RBPs
Other
Anopheles gambiae
RBPs
107 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GG24622
Drosophila erecta
FBgn0116754
N
0.820
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.820
GI18007
Drosophila mojavensis
FBgn0140747
N
0.820
GL18627
Drosophila persimilis
FBgn0156228
N
0.820
GE15854
Drosophila yakuba
FBgn0233416
N
0.820
GJ19628
Drosophila virilis
FBgn0206770
N
0.820
dbe
Drosophila melanogaster
FBgn0020305
N
0.820
GK24616
Drosophila willistoni
FBgn0226576
N
0.820
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.800
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.800
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.800
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.800
Krr1
Mus musculus
ENSMUSG00000063334
N
0.800
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.780
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.780
KRR1
Sorex araneus
ENSSARG00000009967
N
0.780
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.780
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.780
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.780
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.780
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.780
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.780
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.780
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.780
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.780
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.780
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.780
KRR1
Danio rerio
ENSDARG00000011246
N
0.780
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.780
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.780
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.780
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.780
KRR1
Felis catus
ENSFCAG00000005207
N
0.780
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.780
KRR1
Homo sapiens
ENSG00000111615
N
0.780
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.780
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.780
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.780
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.765
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.760
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.760
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.760
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.760
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.760
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.760
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.760
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.760
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.760
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.760
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.760
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.760
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.760
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.760
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.760
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.760
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.760
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.760
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.760
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.740
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.740
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.740
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.740
nasonia_NCBI_hmm386444
Nasonia vitripennis
nasonia_NCBI_hmm386444
N
0.732
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.725
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.725
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.725
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.725
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.720
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.720
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.720
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.720
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.720
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.720
cgd3_2950
Cryptosporidium parvum
cgd3_2950
N
0.720
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.720
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.720
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.720
Chro.30334
Cryptosporidium hominis
Chro.30334
N
0.720
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.720
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.720
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.720
KRR1
Candida albicans
orf19.661
N
0.720
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.720
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.720
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.719
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.717
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.714
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.706
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.700
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.700
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.700
UM03241
Ustilago maydis
UM03241
N
0.700
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.700
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.700
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.700
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.700
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.700
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.700
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.700
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.700
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.700
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.700
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.700
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.700
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.700
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.700
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.700