AT1G09660 (Arabidopsis thaliana)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AT1G09660-TAIR-G T18086_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT1G09660.1-P KH 148 207
AT1G09660.2-P KH 148 208

Links

Other KH family RBPs
Other Arabidopsis thaliana RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 1.000
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.869
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.833
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.817
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.817
SB03G042090 Sorghum bicolor Sb03g042090 N 0.800
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.800
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.794
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.787
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.767
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.754
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.754
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.754
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.733
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.733
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.733
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.721
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.721
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.717
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.717
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.717
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.717
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.717
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.710
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.710
chr6.LjT09E22.140.nd Lotus japonicus chr6.LjT09E22.140.nd N 0.708
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.705