CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CMG145C
(
Cyanidioschyzon merolae
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CMG145C
T01786_0.6
Cyanidioschyzon merolae Genome Project (2008-Jan-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CMG145C
CCCH ZF
1
24
MVVCRYYLQGNCKFGDRCRYEHPP
Links
Other
CCCH ZF
family RBPs
Other
Cyanidioschyzon merolae
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ANIA_04595
Aspergillus nidulans
CADANIAG00005841
N
0.708
estExt_fgenesh1_pm.C_60202
Trichoderma virens
estExt_fgenesh1_pm.C_60202
N
0.708
estExt_fgenesh5_pg.C_80296
Trichoderma reesei
estExt_fgenesh5_pg.C_80296
N
0.708
MGYG_05741
Microsporum gypseum
MGYG_05741
N
0.708
TEQG_01674
Trichophyton equinum
TEQG_01674
N
0.708
TERG_02605
Trichophyton rubrum
TERG_02605
N
0.708
TESG_01971
Trichophyton tonsurans
TESG_01971
N
0.708
XP_001192565.1
Strongylocentrotus purpuratus
XP_001192565.1
N
0.750
XP_791728.2
Strongylocentrotus purpuratus
XP_791728.2
N
0.750