CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_04595
(
Aspergillus nidulans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADANIAG00005841
T02065_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00005841
CCCH ZF
1
23
MVVCTYFQQGRCKFGDRCKNEHP
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus nidulans
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
An07g06750
Aspergillus niger
CADANGAG00005948
N
0.913
AFUA_2G02160
Aspergillus fumigatus
CADAFUAG00003346
N
0.870
Pc20g04370
Penicillium chrysogenum
Pc20g04370
N
0.870
AFLA_043160
Aspergillus flavus
CADAFLAG00005643
N
0.826
NFIA_034530
Neosartorya fischeri
CADNFIAG00002955
N
0.826
CIMG_05516
Coccidioides immitis
CIMG_05516
N
0.783
fgenesh1_pg.00009_#_218
Aspergillus carbonarius
fgenesh1_pg.00009_#_218
N
0.783
TESG_01971
Trichophyton tonsurans
TESG_01971
N
0.750
TEQG_01674
Trichophyton equinum
TEQG_01674
N
0.750
MGYG_05741
Microsporum gypseum
MGYG_05741
N
0.750
TERG_02605
Trichophyton rubrum
TERG_02605
N
0.750
ACLA_092660
Aspergillus clavatus
CADACLAG00008386
N
0.739
MCYG_08333
Microsporum canis
MCYG_08333
N
0.708
CMG145C
Cyanidioschyzon merolae
CMG145C
N
0.708