CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CPSF4L
(
Gorilla gorilla
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSGGOG00000026659
T02772_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000028251
CCCH ZF
37
61
ASAVCNFFTKGLCEKGKLCPFRHDR
ENSGGOP00000028251
CCCH ZF
63
87
EKMVVCKHWLRGLCKKGDHCKFLHQ
ENSGGOP00000028251
CCCH ZF
91
116
TRMPECYFYSKFGDCSNKECPFLHVK
ENSGGOP00000028251
CCCH ZF
119
144
FKSQDCPWYDQGFCKDGPLCKYRHVP
ENSGGOP00000028251
CCCH ZF
145
165
RIMCLNYLVGFCPEGPKCQFA
Links
Other
CCCH ZF
family RBPs
Other
Gorilla gorilla
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSF4L
Homo sapiens
ENSG00000187959
N
0.992
CPSF4L
Loxodonta africana
ENSLAFG00000010697
N
0.789
CPSF4L
Monodelphis domestica
ENSMODG00000025672
N
0.762
CPSF4L
Oryctolagus cuniculus
ENSOCUG00000026495
N
0.760