MKRN1 (Tupaia belangeri)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTBEG00000004564 T03426_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000003924 CCCH ZF 1 19
ENSTBEP00000003924 CCCH ZF 23 48
ENSTBEP00000003924 CCCH ZF 146 171

Links

Other CCCH ZF family RBPs
Other Tupaia belangeri RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_01555 Chaetomium globosum CHGG_01555 N 0.000
estExt_fgenesh1_pg.C_120120 Neurospora tetrasperma estExt_fgenesh1_pg.C_120120 N 0.000
estExt_Genewise1.C_21399 Myceliophthora thermophila estExt_Genewise1.C_21399 N 0.000
estExt_GeneWisePlus.C_30660 Trichoderma reesei estExt_GeneWisePlus.C_30660 N 0.000
e_gw1.14.516.1 Trichoderma atroviride e_gw1.14.516.1 N 0.000
e_gw1.4.1466.1 Neurospora discreta e_gw1.4.1466.1 N 0.000
e_gw1.4.2238.1 Thielavia terrestris e_gw1.4.2238.1 N 0.000
fgenesh1_pm.C_scaffold_4000211 Cryphonectria parasitica fgenesh1_pm.C_scaffold_4000211 N 0.000
fgenesh1_pm.sca_1_chr1_3_0000206 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000206 N 0.000
FGSG_11793 Fusarium graminearum FGSG_11793 N 0.000
FOXG_00437 Fusarium oxysporum FOXG_00437 N 0.000
FVEG_01075 Fusarium verticillioides FVEG_01075 N 0.000
GLRG_04425 Colletotrichum graminicola GLRG_04425 N 0.000
gw1.11.630.1 Trichoderma virens gw1.11.630.1 N 0.000
MGG_04351 Magnaporthe oryzae MGG_04351 N 0.000
Pa_1_7200 Podospora anserina Pa_1_7200 N 0.000
Pc14g01320 Penicillium chrysogenum Pc14g01320 N 0.000
VDAG_03182 Verticillium dahliae VDAG_03182 N 0.000