fgenesh1_pm.C_scaffold_4000211 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_4000211 T56601_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_4000211 RRM 26 98

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_120120 Neurospora tetrasperma estExt_fgenesh1_pg.C_120120 N 0.822
e_gw1.4.1466.1 Neurospora discreta e_gw1.4.1466.1 N 0.822
NCU02780 Neurospora crassa NCU02780 N 0.822
CHGG_01555 Chaetomium globosum CHGG_01555 N 0.795
e_gw1.4.2238.1 Thielavia terrestris e_gw1.4.2238.1 N 0.795
estExt_Genewise1.C_21399 Myceliophthora thermophila estExt_Genewise1.C_21399 N 0.781
gw1.11.630.1 Trichoderma virens gw1.11.630.1 N 0.740
Pa_1_7200 Podospora anserina Pa_1_7200 N 0.726
fgenesh1_pm.sca_1_chr1_3_0000206 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000206 N 0.726
e_gw1.14.516.1 Trichoderma atroviride e_gw1.14.516.1 N 0.726
FOXG_00437 Fusarium oxysporum FOXG_00437 N 0.712
FVEG_01075 Fusarium verticillioides FVEG_01075 N 0.712
VDAG_03182 Verticillium dahliae VDAG_03182 N 0.712
MGG_04351 Magnaporthe oryzae MGG_04351 N 0.703