CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Ame_R015032
(
Ailuropoda melanoleuca
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
Ame_R015032
T05969_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R015032
CCCH ZF
496
509
NKQDCKYGDNCTFA
Ame_R015032
CCCH ZF
759
785
QQYDLCIHAQSGRKCQYVGNCSFAHSP
Ame_R015032
CCCH ZF
892
917
EFRLCDRLQKGKACPDGDKCRCAHGQ
Links
Other
CCCH ZF
family RBPs
Other
Ailuropoda melanoleuca
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H7B
Callithrix jacchus
ENSCJAG00000004889
N
0.985
ZC3H7B
Tursiops truncatus
ENSTTRG00000003362
N
0.757