CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H7B
(
Callithrix jacchus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSCJAG00000004889
T02352_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000009023
CCCH ZF
505
518
NKQDCKYGDNCTFA
ENSCJAP00000009023
CCCH ZF
779
805
QQYDLCIHAQNGRKCQYVGNCSFAHSP
ENSCJAP00000009023
CCCH ZF
912
937
EFRLCDRLQKGKACPDGDKCRCAHGQ
ENSCJAP00000009037
CCCH ZF
504
517
NKQDCKYGDNCTFA
ENSCJAP00000009037
CCCH ZF
767
793
QQYDLCIHAQNGRKCQYVGNCSFAHSP
ENSCJAP00000009037
CCCH ZF
900
925
EFRLCDRLQKGKACPDGDKCRCAHGQ
ENSCJAP00000009045
CCCH ZF
490
503
NKQDCKYGDNCTFA
ENSCJAP00000009045
CCCH ZF
764
790
QQYDLCIHAQNGRKCQYVGNCSFAHSP
ENSCJAP00000009045
CCCH ZF
897
922
EFRLCDRLQKGKACPDGDKCRCAHGQ
ENSCJAP00000009081
CCCH ZF
522
535
NKQDCKYGDNCTFA
ENSCJAP00000009081
CCCH ZF
787
813
QQYDLCIHAQNGRKCQYVGNCSFAHSP
ENSCJAP00000009081
CCCH ZF
920
945
EFRLCDRLQKGKACPDGDKCRCAHGQ
Links
Other
CCCH ZF
family RBPs
Other
Callithrix jacchus
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015032
Ailuropoda melanoleuca
Ame_R015032
N
0.985
ZC3H7B
Tursiops truncatus
ENSTTRG00000003362
N
0.770