SRSF7 (Oryzias latipes)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSORLG00000000746 T07308_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.821
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.821
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000000915 RRM 18 83
ENSORLP00000000915 CCHC ZF 107 124
ENSORLP00000000917 RRM 18 83
ENSORLP00000000917 CCHC ZF 107 124
ENSORLP00000000921 RRM 18 83
ENSORLP00000000921 CCHC ZF 107 124

Links

Other CCHC ZF,RRM family RBPs
Other Oryzias latipes RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2610027L16Rik Dipodomys ordii ENSDORG00000012287 N 0.000