CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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2610027L16Rik
(
Dipodomys ordii
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSDORG00000012287
T24185_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000011551
PUF
194
224
SDDFLFYCGDTHGSFVVRTLLQVLGGTLLES
ENSDORP00000011551
PUF
325
351
FLQDQTSSRLLEQVLLVLEPPKLQSLF
ENSDORP00000011551
PUF
355
386
FQGQLLTLAAHPIANFPLQRLLDAVTSPELXX
Links
Other
PUF
family RBPs
Other
Dipodomys ordii
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C14orf21
Ochotona princeps
ENSOPRG00000016676
N
0.804