POPTR_0008s03290 (Populus trichocarpa)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		POPTR_0008s03290 T07415_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s03290.1 RRM 1 41
POPTR_0008s03290.1 CCHC ZF 80 97

Links

Other CCHC ZF,RRM family RBPs
Other Populus trichocarpa RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.308610 Cucumis sativus Cucsa.308610 N 0.847
PK09039.1 Cannabis sativa PK09039.1 N 0.867
B9HUL0_POPTR Populus trichocarpa POPTR_0010s23550 N 1.000