CJA12261 (Caenorhabditis japonica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 CJA12261 T09691_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CJA12261 CCHC ZF 4 21
CJA12261 CCHC ZF 36 53
CJA12261 CCHC ZF 71 88
CJA12261 CCHC ZF 110 127
CJA12261 CCHC ZF 134 151

Links

Other CCHC ZF family RBPs
Other Caenorhabditis japonica RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG13587 Caenorhabditis briggsae CBG13587 N 0.900
CBN03982 Caenorhabditis brenneri CBN03982 N 0.856
CRE13706 Caenorhabditis remanei CRE13706 N 0.889
K08D12.3 Caenorhabditis elegans K08D12.3 N 0.844
PPA10881 Pristionchus pacificus PPA10881 N 0.733