LOC_Os06g32470 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g32470 T11667_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g32470.1 CCHC ZF 249 266

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29889.m003364 Ricinus communis 29889.m003364 N 0.000
BGIOSIBCE010884 Oryza indica BGIOSIBCE010884 N 0.000
BRADI1G64100 Brachypodium distachyon BRADI1G64100 N 0.000
BRADI2G12380 Brachypodium distachyon BRADI2G12380 N 0.000
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.000
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.000
Cucsa.135220 Cucumis sativus Cucsa.135220 N 0.000
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.000
LOC_Os03g20180 Oryza sativa LOC_Os03g20180 N 0.000
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.000
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.000
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.000
ppa018635m Prunus persica ppa018635m N 0.000