LOC_Os09g02960 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g02960 T12069_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g02960.1 CCHC ZF 100 117

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os04g30440 Oryza sativa LOC_Os04g30440 N 0.889
LOC_Os05g19460 Oryza sativa LOC_Os05g19460 N 0.833
LOC_Os05g20450 Oryza sativa LOC_Os05g20450 N 0.833
LOC_Os05g24100 Oryza sativa LOC_Os05g24100 N 0.833
LOC_Os04g48590 Oryza sativa LOC_Os04g48590 N 0.833
LOC_Os06g17350 Oryza sativa LOC_Os06g17350 N 0.833
LOC_Os03g31530 Oryza sativa LOC_Os03g31530 N 0.833
LOC_Os03g37210 Oryza sativa LOC_Os03g37210 N 0.833
LOC_Os09g04240 Oryza sativa LOC_Os09g04240 N 0.833
LOC_Os06g22750 Oryza sativa LOC_Os06g22750 N 0.833
LOC_Os07g33150 Oryza sativa LOC_Os07g33150 N 0.833
LOC_Os07g37900 Oryza sativa LOC_Os07g37900 N 0.833
LOC_Os08g31150 Oryza sativa LOC_Os08g31150 N 0.833
LOC_Os07g28370 Oryza sativa LOC_Os07g28370 N 0.833
LOC_Os06g32470 Oryza sativa LOC_Os06g32470 N 0.833
LOC_Os06g25560 Oryza sativa LOC_Os06g25560 N 0.833
LOC_Os06g25850 Oryza sativa LOC_Os06g25850 N 0.833
LOC_Os03g16530 Oryza sativa LOC_Os03g16530 N 0.833
LOC_Os03g29520 Oryza sativa LOC_Os03g29520 N 0.833
LOC_Os11g19610 Oryza sativa LOC_Os11g19610 N 0.833
LOC_Os12g24610 Oryza sativa LOC_Os12g24610 N 0.833
LOC_Os11g02880 Oryza sativa LOC_Os11g02880 N 0.833
LOC_Os09g14470 Oryza sativa LOC_Os09g14470 N 0.833
LOC_Os03g15140 Oryza sativa LOC_Os03g15140 N 0.833
LOC_Os01g51340 Oryza sativa LOC_Os01g51340 N 0.833
LOC_Os11g09919 Oryza sativa LOC_Os11g09919 N 0.833
LOC_Os02g25170 Oryza sativa LOC_Os02g25170 N 0.833
LOC_Os10g21510 Oryza sativa LOC_Os10g21510 N 0.778
LOC_Os07g15470 Oryza sativa LOC_Os07g15470 N 0.778
LOC_Os06g28490 Oryza sativa LOC_Os06g28490 N 0.778
LOC_Os08g19540 Oryza sativa LOC_Os08g19540 N 0.778
LOC_Os03g33828 Oryza sativa LOC_Os03g33828 N 0.778
LOC_Os02g36470 Oryza sativa LOC_Os02g36470 N 0.778
LOC_Os02g24520 Oryza sativa LOC_Os02g24520 N 0.778
LOC_Os01g24860 Oryza sativa LOC_Os01g24860 N 0.778
LOC_Os09g07400 Oryza sativa LOC_Os09g07400 N 0.778
LOC_Os05g26000 Oryza sativa LOC_Os05g26000 N 0.778
nasonia_NCBI_hmm18164 Nasonia vitripennis nasonia_NCBI_hmm18164 N 0.722
nasonia_NCBI_hmm412904 Nasonia vitripennis nasonia_NCBI_hmm412904 N 0.722
nasonia_NCBI_hmm38614 Nasonia vitripennis nasonia_NCBI_hmm38614 N 0.722
nasonia_NCBI_hmm259264 Nasonia vitripennis nasonia_NCBI_hmm259264 N 0.722
LOC_Os12g26310 Oryza sativa LOC_Os12g26310 N 0.722