LOC_Os08g31920 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os08g31920 T12029_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g31920.1 CCHC ZF 255 272

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cucsa.265830 Cucumis sativus Cucsa.265830 N 0.722
Genemark.10134_g Serpula lacrymans Genemark.10134_g N 0.778
Genemark.10431_g Serpula lacrymans Genemark.10431_g N 0.722
Genemark.10542_g Serpula lacrymans Genemark.10542_g N 0.778
Genemark.10616_g Serpula lacrymans Genemark.10616_g N 0.778
Genemark.10994_g Serpula lacrymans Genemark.10994_g N 0.722
Genemark.114_g Serpula lacrymans Genemark.114_g N 0.722
Genemark.11728_g Serpula lacrymans Genemark.11728_g N 0.722
Genemark.12078_g Serpula lacrymans Genemark.12078_g N 0.722
Genemark.12100_g Serpula lacrymans Genemark.12100_g N 0.722
Genemark.12630_g Serpula lacrymans Genemark.12630_g N 0.722
Genemark.12634_g Serpula lacrymans Genemark.12634_g N 0.722
Genemark.1711_g Serpula lacrymans Genemark.1711_g N 0.722
Genemark.1916_g Serpula lacrymans Genemark.1916_g N 0.722
Genemark.2746_g Serpula lacrymans Genemark.2746_g N 0.722
Genemark.2836_g Serpula lacrymans Genemark.2836_g N 0.778
Genemark.291_g Serpula lacrymans Genemark.291_g N 0.722
Genemark.3177_g Serpula lacrymans Genemark.3177_g N 0.722
Genemark.398_g Serpula lacrymans Genemark.398_g N 0.722
Genemark.4605_g Serpula lacrymans Genemark.4605_g N 0.722
Genemark.4784_g Serpula lacrymans Genemark.4784_g N 0.722
Genemark.697_g Serpula lacrymans Genemark.697_g N 0.722
Genemark.7181_g Serpula lacrymans Genemark.7181_g N 0.778
Genemark.7317_g Serpula lacrymans Genemark.7317_g N 0.722
Genemark.8449_g Serpula lacrymans Genemark.8449_g N 0.722
Genemark.8722_g Serpula lacrymans Genemark.8722_g N 0.722
Genemark.9154_g Serpula lacrymans Genemark.9154_g N 0.778
Genemark.920_g Serpula lacrymans Genemark.920_g N 0.722
LOC_Os10g25990 Oryza sativa LOC_Os10g25990 N 0.722