CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SB08G018400
(
Sorghum bicolor
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Sb08g018400
T12903_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g018400.1
CCHC ZF
982
999
KICYKCKKAGHLSRDCPE
Links
Other
CCHC ZF
family RBPs
Other
Sorghum bicolor
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG18298
Caenorhabditis briggsae
CBG18298
N
0.000
CBN17666
Caenorhabditis brenneri
CBN17666
N
0.000
CJA14237
Caenorhabditis japonica
CJA14237
N
0.000
CRE04844
Caenorhabditis remanei
CRE04844
N
0.000
LOAG_08235
Loa loa
LOAG_08235
N
0.000
cey-4
Caenorhabditis elegans
Y39A1C.3
N
0.000