fgenesh1_pg.C_scaffold_264000001 (Phytophthora ramorum)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.C_scaffold_264000001 T13897_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_264000001 CCHC ZF 96 113

Links

Other CCHC ZF family RBPs
Other Phytophthora ramorum RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC41242 Xenopus laevis AAC41242 N 0.000
AAH71023 Xenopus laevis AAH71023 N 0.000
AAH97658 Xenopus laevis AAH97658 N 0.000
AAI70359 Xenopus laevis AAI70359 N 0.000
AAI70361 Xenopus laevis AAI70361 N 0.000
Ame_R003159 Ailuropoda melanoleuca Ame_R003159 N 0.000
A3DUJ0_BOVIN Bos taurus ENSBTAG00000000502 N 0.000
ENSCAFG00000005867 Canis familiaris ENSCAFG00000005867 N 0.000
DAZL Choloepus hoffmanni ENSCHOG00000005264 N 0.000
ENSCJAG00000003593 Callithrix jacchus ENSCJAG00000003593 N 0.000
ENSCPOG00000007628 Cavia porcellus ENSCPOG00000007628 N 0.000
LOC100063430 Equus caballus ENSECAG00000010923 N 0.000
ENSEEUG00000005973 Erinaceus europaeus ENSEEUG00000005973 N 0.000
DAZL Homo sapiens ENSG00000092345 N 0.000
DAZ3 Homo sapiens ENSG00000187191 N 0.000
DAZ1 Homo sapiens ENSG00000188120 N 0.000
DAZ4 Homo sapiens ENSG00000205916 N 0.000
DAZ2 Homo sapiens ENSG00000205944 N 0.000
DAZL_CHICK Gallus gallus ENSGALG00000011243 N 0.000
DAZL Gorilla gorilla ENSGGOG00000023632 N 0.000
DAZL Loxodonta africana ENSLAFG00000009132 N 0.000
ENSMEUG00000007283 Macropus eugenii ENSMEUG00000007283 N 0.000
ENSMGAG00000010878 Meleagris gallopavo ENSMGAG00000010878 N 0.000
O77586_MACMU Macaca mulatta ENSMMUG00000011361 N 0.000
XM_001380213.1 Monodelphis domestica ENSMODG00000014730 N 0.000
Dazl Mus musculus ENSMUSG00000010592 N 0.000
ENSOANG00000006742 Ornithorhynchus anatinus ENSOANG00000006742 N 0.000
ENSOCUG00000012635 Oryctolagus cuniculus ENSOCUG00000012635 N 0.000
ENSOGAG00000006983 Otolemur garnettii ENSOGAG00000006983 N 0.000
DAZL Procavia capensis ENSPCAG00000016182 N 0.000
ENSPPYG00000014080 Pongo pygmaeus ENSPPYG00000014080 N 0.000
O77584_PANTR Pan troglodytes ENSPTRG00000014674 N 0.000
Q56GW9_PANTR Pan troglodytes ENSPTRG00000022519 N 0.000
Q9TV38_PANTR Pan troglodytes ENSPTRG00000022523 N 0.000
Q56GW9_PANTR Pan troglodytes ENSPTRG00000023120 N 0.000
Q56GW9_PANTR Pan troglodytes ENSPTRG00000028811 N 0.000
Q9TV38_PANTR Pan troglodytes ENSPTRG00000033761 N 0.000
DAZL Pteropus vampyrus ENSPVAG00000007836 N 0.000
Dazl Rattus norvegicus ENSRNOG00000023474 N 0.000
ENSSARG00000008473 Sorex araneus ENSSARG00000008473 N 0.000
ENSTBEG00000012225 Tupaia belangeri ENSTBEG00000012225 N 0.000
DAZL Taeniopygia guttata ENSTGUG00000003145 N 0.000
ENSTSYG00000000788 Tarsius syrichta ENSTSYG00000000788 N 0.000
ENSVPAG00000000468 Vicugna pacos ENSVPAG00000000468 N 0.000
dazl Xenopus tropicalis ENSXETG00000025199 N 0.000
O57437 Xenopus laevis O57437 N 0.000
Q4V7Y4 Xenopus laevis Q4V7Y4 N 0.000