CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ppa018267m
(
Prunus persica
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ppa018267m
T16247_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ppa018267m
CCHC ZF
254
271
KRCYRCQGFGHFAVQCPT
Links
Other
CCHC ZF
family RBPs
Other
Prunus persica
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh2_pg.C_sca_1000613
Lottia gigantea
fgenesh2_pg.C_sca_1000613
N
0.722
ppa016105m
Prunus persica
ppa016105m
N
0.944
ppa017087m
Prunus persica
ppa017087m
N
0.944