fgenesh2_pg.C_sca_1000613 (Lottia gigantea)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh2_pg.C_sca_1000613 T14173_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.C_sca_1000613 CCHC ZF 363 380

Links

Other CCHC ZF family RBPs
Other Lottia gigantea RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_224000013 Daphnia pulex fgenesh1_pg.C_scaffold_224000013 N 0.722
fgenesh1_pg.C_scaffold_4378000001 Daphnia pulex fgenesh1_pg.C_scaffold_4378000001 N 0.722
fgenesh1_pg.C_scaffold_2216000001 Daphnia pulex fgenesh1_pg.C_scaffold_2216000001 N 0.722
ppa018267m Prunus persica ppa018267m N 0.722
ppa016105m Prunus persica ppa016105m N 0.722
ppa017087m Prunus persica ppa017087m N 0.722
NCBI_GNO_430500001 Daphnia pulex NCBI_GNO_430500001 N 0.722