CpipJ_CPIJ019402 (Culex pipiens)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 CpipJ_CPIJ019402 T17617_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fmr1
M015_0.6 		Drosophila melanogaster AHGGACR RNAcompete
Ray et al.(2013)
RNCMPT00015 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ019402-RA KH 425 484
CpipJ_CPIJ019402-RA KH 488 556

Links

Other KH family RBPs
Other Culex pipiens RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL009326 Aedes aegypti AAEL009326 I 0.977
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.863
CPIJ019402 Culex quinquefasciatus CPIJ019402 I 1.000
DGIL_AUG5s14500g26t1 Acyrtosiphon pisum DGIL_AUG5s14500g26t1 N 0.771
FMR1 Canis familiaris ENSCAFG00000019085 I 0.710
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.712
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.712
FXR2 Oryzias latipes ENSORLG00000011571 I 0.710
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.712
estExt_fgenesh1_pg.C_690020 Daphnia pulex estExt_fgenesh1_pg.C_690020 N 0.794
Fmr1 Drosophila melanogaster FBgn0028734 D 0.748
GF17134 Drosophila ananassae FBgn0094153 I 0.763
GG17303 Drosophila erecta FBgn0109530 I 0.748
GI24444 Drosophila mojavensis FBgn0147166 I 0.748
GM26187 Drosophila sechellia FBgn0181042 I 0.748
GD20735 Drosophila simulans FBgn0192201 I 0.748
GJ10720 Drosophila virilis FBgn0197997 I 0.748
GK12202 Drosophila willistoni FBgn0214213 I 0.756
GE24705 Drosophila yakuba FBgn0241810 I 0.748
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.855
PHUM440700 Pediculus humanus PHUM440700 I 0.863