CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
AGAP004145
(
Anopheles gambiae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
AGAP004145
T18069_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP004145-PA
KH
133
182
LSRAIGRLAGKGGRTKFTVENTTKTRIILQGSKIHIMGSYKYIQHAKRAL
Links
Other
KH
family RBPs
Other
Anopheles gambiae
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL011832
Aedes aegypti
AAEL011832
N
0.840
AAH42279
Xenopus laevis
AAH42279
N
0.700
AAQ24169
Xenopus laevis
AAQ24169
N
0.700
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.740
BGIBMGA014064
Bombyx mori
BGIBMGA014064
N
0.740
CPIJ015853
Culex quinquefasciatus
CPIJ015853
N
0.820
CPIJ019677
Culex quinquefasciatus
CPIJ019677
N
0.820
CpipJ_CPIJ015853
Culex pipiens
CpipJ_CPIJ015853
N
0.820
CpipJ_CPIJ019677
Culex pipiens
CpipJ_CPIJ019677
N
0.820
DGIL_AUG5s4501g8t1
Acyrtosiphon pisum
DGIL_AUG5s4501g8t1
N
0.740
l(1)G0004
Drosophila melanogaster
FBgn0027334
N
0.745
GE17874
Drosophila yakuba
FBgn0068478
N
0.745
GA11169-RA
Drosophila pseudoobscura
FBgn0071224
N
0.745
GF20246
Drosophila ananassae
FBgn0097253
N
0.745
GG19285
Drosophila erecta
FBgn0111489
N
0.745
GH12628
Drosophila grimshawi
FBgn0120107
N
0.745
GI11042
Drosophila mojavensis
FBgn0133805
N
0.765
GM23025
Drosophila sechellia
FBgn0177893
N
0.745
GD17488
Drosophila simulans
FBgn0189040
N
0.745
GJ15820
Drosophila virilis
FBgn0203007
N
0.745
GK20148
Drosophila willistoni
FBgn0222145
N
0.725
fgenesh1_pg.C_scaffold_107000027
Daphnia pulex
fgenesh1_pg.C_scaffold_107000027
N
0.760
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.720
PHUM356890
Pediculus humanus
PHUM356890
N
0.720
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.700