CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PHUM356890
(
Pediculus humanus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PHUM356890
T20175_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM356890-PA
KH
175
224
LSRAIGRLAGKSGRTKYTIENATKTRIVLADSKIHILGSFNNIQLARRAI
Links
Other
KH
family RBPs
Other
Pediculus humanus
RBPs
198 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.940
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.880
BGIBMGA014064
Bombyx mori
BGIBMGA014064
N
0.880
GA11169-RA
Drosophila pseudoobscura
FBgn0071224
N
0.863
GI11042
Drosophila mojavensis
FBgn0133805
N
0.863
GH12628
Drosophila grimshawi
FBgn0120107
N
0.863
GJ15820
Drosophila virilis
FBgn0203007
N
0.863
DGIL_AUG5s4501g8t1
Acyrtosiphon pisum
DGIL_AUG5s4501g8t1
N
0.860
GK20148
Drosophila willistoni
FBgn0222145
N
0.843
GD17488
Drosophila simulans
FBgn0189040
N
0.843
l(1)G0004
Drosophila melanogaster
FBgn0027334
N
0.843
GG19285
Drosophila erecta
FBgn0111489
N
0.843
GE17874
Drosophila yakuba
FBgn0068478
N
0.843
GF20246
Drosophila ananassae
FBgn0097253
N
0.843
GM23025
Drosophila sechellia
FBgn0177893
N
0.843
fgenesh1_pg.C_scaffold_107000027
Daphnia pulex
fgenesh1_pg.C_scaffold_107000027
N
0.820
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.820
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.800
AAQ24169
Xenopus laevis
AAQ24169
N
0.800
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.800
fgeneshCV_pg.C_scaffold_11000142
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_11000142
N
0.800
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.800
Genemark1.5719_g
Coccomyxa C 169
Genemark1.5719_g
N
0.800
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.800
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.800
CPIJ019677
Culex quinquefasciatus
CPIJ019677
N
0.800
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.800
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.800
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.800
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.800
pno1
Danio rerio
ENSDARG00000008502
N
0.800
CpipJ_CPIJ019677
Culex pipiens
CpipJ_CPIJ019677
N
0.800
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.800
CPIJ015853
Culex quinquefasciatus
CPIJ015853
N
0.800
CpipJ_CPIJ015853
Culex pipiens
CpipJ_CPIJ015853
N
0.800
AAH42279
Xenopus laevis
AAH42279
N
0.800
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.780
ENSCING00000009577
Ciona intestinalis
ENSCING00000009577
N
0.780
PITG_01680
Phytophthora infestans
PITG_01680
N
0.780
ENSCSAVG00000001303
Ciona savignyi
ENSCSAVG00000001303
N
0.780
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.780
s_468317
Phytophthora sojae
s_468317
N
0.780
fgenesh2_pm.scaffold_78000001
Branchiostoma floridae
fgenesh2_pm.scaffold_78000001
N
0.780
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.780
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.780
fgenesh2_pg.scaffold_196000015
Branchiostoma floridae
fgenesh2_pg.scaffold_196000015
N
0.780
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.780
fgenesh1_pg.scaffold_18000119
Nematostella vectensis
fgenesh1_pg.scaffold_18000119
N
0.780
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.780
PNO1
Homo sapiens
ENSG00000115946
N
0.760
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.760
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.760
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.760
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.760
Chlre2_kg.scaffold_20000177
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_20000177
N
0.760
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.760
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.760
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.760
Bm1_42995
Brugia malayi
Bm1_42995
N
0.760
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.760
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.760
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.760
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.760
AAEL011832
Aedes aegypti
AAEL011832
N
0.760
WUBG_12774
Wuchereria bancrofti
WUBG_12774
N
0.760
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.760
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.760
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.760
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.760
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.760
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.760
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.760
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.760
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.760
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.760
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.760
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.760
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.760
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.760
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.760
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.760
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.760
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.760
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.760
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.760
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.760
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.760
LOAG_05624
Loa loa
LOAG_05624
N
0.760
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.760
estExt_Genewise1Plus.C_600117
Volvox carteri
estExt_Genewise1Plus.C_600117
N
0.760
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.760
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.760
LjSGA_017760.2
Lotus japonicus
LjSGA_017760.2
N
0.740
PK08146.1
Cannabis sativa
PK08146.1
N
0.740
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.740
28525.m000262
Ricinus communis
28525.m000262
N
0.740
MDP0000120063
Malus x domestica
MDP0000120063
N
0.740
PTSG_04415
Salpingoeca rosetta
PTSG_04415
N
0.740
MDP0000754021
Malus x domestica
MDP0000754021
N
0.740
MDP0000265633
Malus x domestica
MDP0000265633
N
0.740
Medtr3g080390
Medicago truncatula
Medtr3g080390
N
0.740
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.740
MDP0000136407
Malus x domestica
MDP0000136407
N
0.740
Cucsa.201760
Cucumis sativus
Cucsa.201760
N
0.740
cassava30594.valid.m1
Manihot esculenta
cassava30594.valid.m1
N
0.740
estExt_Genewise1.C_5820041
Capitella teleta
estExt_Genewise1.C_5820041
N
0.740
e_gw1.12.287.1
Serpula lacrymans
e_gw1.12.287.1
N
0.740
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.740
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.740
estExt_Genewise1.C_260084
Melampsora laricis populina
estExt_Genewise1.C_260084
N
0.740
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.740
orf19.7618
Candida albicans
orf19.7618
N
0.740
Cucsa.041830
Cucumis sativus
Cucsa.041830
N
0.740
ppa009897m
Prunus persica
ppa009897m
N
0.740
gw1.1.2472.1
Pleurotus ostreatus
gw1.1.2472.1
N
0.740
Pno1
Mus musculus
ENSMUSG00000020116
N
0.740
PTTG_01898
Puccinia triticina
PTTG_01898
N
0.740
SNAPOd2T00014997001
Oikopleura dioica
SNAPOd2T00014997001
N
0.740
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.740
estExt_fgeneshHS_pm.C_280002
Naegleria gruberi
estExt_fgeneshHS_pm.C_280002
N
0.740
PNO1_IXOSC
Ixodes scapularis
ISCW023560
N
0.740
B9N5M8_POPTR
Populus trichocarpa
POPTR_0011s16880
N
0.740
B9GHH7_POPTR
Populus trichocarpa
POPTR_0001s47320
N
0.740
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.740
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.740
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.740
estExt_Genewise1Plus.C_10658
Mucor circinelloides
estExt_Genewise1Plus.C_10658
N
0.740
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.740
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.740
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.740
SNAPOd2T00029081001
Oikopleura dioica
SNAPOd2T00029081001
N
0.740
ppa011086m
Prunus persica
ppa011086m
N
0.740
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.720
PBANKA_133250
Plasmodium berghei
PBANKA_133250
N
0.720
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.720
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.720
XM_001110046.1
Macaca mulatta
ENSMMUG00000003556
N
0.720
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.720
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.720
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.720
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.720
PVX_117000
Plasmodium vivax
PVX_117000
N
0.720
Glyma18g08100.1
Glycine max
Glyma18g08100.1
N
0.720
mgf006621m
Mimulus guttatus
mgf006621m
N
0.720
Glyma18g08080.1
Glycine max
Glyma18g08080.1
N
0.720
Glyma08g44800.1
Glycine max
Glyma08g44800.1
N
0.720
estExt_Genewise1Plus.C_250095
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_250095
N
0.720
GID1.0042265
Dictyostelium purpureum
GID1.0042265
N
0.720
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.720
PY03646
Plasmodium yoelii
PY03646
N
0.720
PF14_0661
Plasmodium falciparum
PF14_0661
N
0.720
PCHAS_133710
Plasmodium chabaudi
PCHAS_133710
N
0.720
PKH_123590
Plasmodium knowlesi
PKH_123590
N
0.720
EFA79428.1
Polysphondylium pallidum
EFA79428.1
N
0.720
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.720
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.720
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.720
e_gw1.8.261.1
Sporobolomyces roseus
e_gw1.8.261.1
N
0.720
cassava7030.valid.m1
Manihot esculenta
cassava7030.valid.m1
N
0.720
e_gw1.7.528.1
Ostreococcus RCC809
e_gw1.7.528.1
N
0.720
e_gw1.4.614.1
Micromonas pusilla
e_gw1.4.614.1
N
0.720
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.720
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.720
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.720
AMAG_14219
Allomyces macrogynus
AMAG_14219
N
0.720
e_gwh1.2.512.1
Laccaria bicolor
e_gwh1.2.512.1
N
0.720
e_gwEuk.7.409.1
Ostreococcus lucimarinus
e_gwEuk.7.409.1
N
0.720
AMAG_12889
Allomyces macrogynus
AMAG_12889
N
0.720
PNO1
Ashbya gossypii
PNO1
N
0.720
AGAP004145
Anopheles gambiae
AGAP004145
N
0.720
ENSCJAG00000022611
Callithrix jacchus
ENSCJAG00000022611
N
0.720
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.720
estExt_fgenesh2_kg.C_20130
Agaricus bisporus
estExt_fgenesh2_kg.C_20130
N
0.720
e_gw1.2.756.1
Heterobasidion annosum
e_gw1.2.756.1
N
0.720
estExt_fgenesh2_pm.C_sca_70005
Lottia gigantea
estExt_fgenesh2_pm.C_sca_70005
N
0.720
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.720
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.720
pno1
Dictyostelium discoideum
DDB_G0287557
N
0.720
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.720
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.706
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.700
Minc09852
Meloidogyne incognita
Minc09852
N
0.700
AMSG_02733
Thecamonas trahens
AMSG_02733
N
0.700
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.700
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.700
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.700
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.700
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.700
CJA15618
Caenorhabditis japonica
CJA15618
N
0.700
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.700
0700010277
Ostreococcus tauri
0700010277
N
0.700
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.700
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.700
Minc08810
Meloidogyne incognita
Minc08810
N
0.700
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.700
fgenesh1_kg.C_scaffold_5000048
Selaginella moellendorfii
fgenesh1_kg.C_scaffold_5000048
N
0.700
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.700
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.700