CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP3
(
Oryctolagus cuniculus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOCUG00000006183
T19186_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000005358
KH
79
141
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSOCUP00000005358
KH
164
228
IQEVLIPASKVGLVIGKGGETIKQLQERTRVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV
ENSOCUP00000005358
KH
255
305
SMEVSVPRFAVGIVIGRNGETIKKIQSDAGVRIQFRPGWLPRVSEALGLCR
Links
Other
KH
family RBPs
Other
Oryctolagus cuniculus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP1
Dasypus novemcinctus
ENSDNOG00000013200
N
0.701
FUBP3
Erinaceus europaeus
ENSEEUG00000000550
N
0.713
FUBP1
Echinops telfairi
ENSETEG00000000948
N
0.701
FUBP3
Homo sapiens
ENSG00000107164
N
0.841
FUBP3
Macaca mulatta
ENSMMUG00000008249
N
0.837
FUBP3
Pan troglodytes
ENSPTRG00000021474
N
0.841