CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP1
(
Dasypus novemcinctus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSDNOG00000013200
T18656_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000010239
KH
31
93
TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLL
ENSDNOP00000010239
KH
116
180
VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMV
ENSDNOP00000010239
KH
206
268
GIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
Links
Other
KH
family RBPs
Other
Dasypus novemcinctus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP1
Echinops telfairi
ENSETEG00000000948
N
1.000
KHSRP
Oryctolagus cuniculus
ENSOCUG00000026747
N
0.822
KHSRP
Homo sapiens
ENSG00000088247
D
0.822
ENSPPYG00000001219
Pongo pygmaeus
ENSPPYG00000001219
I
0.780
FUBP3
Pan troglodytes
ENSPTRG00000021474
N
0.744
FUBP3
Homo sapiens
ENSG00000107164
N
0.744
FUBP1
Sorex araneus
ENSSARG00000011730
N
0.742
FUBP3
Macaca mulatta
ENSMMUG00000008249
N
0.733
estExt_fgenesh2_pg.C_30010
Branchiostoma floridae
estExt_fgenesh2_pg.C_30010
N
0.719
FUBP3
Oryctolagus cuniculus
ENSOCUG00000006183
N
0.701