ENSPPYG00000005714 (Pongo pygmaeus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPPYG00000005714 T19333_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NOVA2
M325_0.6 		Homo sapiens UCAY SELEX
Cook et al.(2011)
682_10811881 		0.914
NOVA2
M323_0.6 		Homo sapiens GGGRGAGUCAUHSCY SELEX
Cook et al.(2011)
680_9789075 		0.914
Nova2
M326_0.6 		Mus musculus Sequence logo not available YCAY CLIP-seq
Cook et al.(2011)
685_18978773 		0.909
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000006496 KH 51 114
ENSPPYP00000006496 KH 173 237
ENSPPYP00000006496 KH 423 488

Links

Other KH family RBPs
Other Pongo pygmaeus RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL009694 Aedes aegypti AAEL009694 N 0.000
AGAP003355 Anopheles gambiae AGAP003355 N 0.000
AGAP003356 Anopheles gambiae AGAP003356 N 0.000
CPIJ014320 Culex quinquefasciatus CPIJ014320 N 0.000
GH21368 Drosophila grimshawi FBgn0128830 N 0.000
GJ19910 Drosophila virilis FBgn0207052 N 0.000
GK17902 Drosophila willistoni FBgn0219901 N 0.000
nasonia_NCBI_hmm254534 Nasonia vitripennis nasonia_NCBI_hmm254534 N 0.000