ENSPPYG00000005714 (Pongo pygmaeus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPPYG00000005714 T19333_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NOVA2
M325_0.6 		Homo sapiens UCAY SELEX
Cook et al.(2011)
682_10811881 		0.914
NOVA2
M323_0.6 		Homo sapiens GGGRGAGUCAUHSCY SELEX
Cook et al.(2011)
680_9789075 		0.914
Nova2
M326_0.6 		Mus musculus Sequence logo not available YCAY CLIP-seq
Cook et al.(2011)
685_18978773 		0.909
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000006496 KH 51 114
ENSPPYP00000006496 KH 173 237
ENSPPYP00000006496 KH 423 488

Links

Other KH family RBPs
Other Pongo pygmaeus RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NOVA1 Cavia porcellus ENSCPOG00000002579 I 1.000
LOC100389932 Callithrix jacchus ENSCJAG00000006217 I 1.000
NOVA1 Pan troglodytes ENSPTRG00000006229 I 1.000
NOVA1 Anolis carolinensis ENSACAG00000000477 I 1.000
Nova1 Dipodomys ordii ENSDORG00000012633 I 1.000
NOVA1 Gorilla gorilla ENSGGOG00000016495 I 1.000
NOVA1 Oryctolagus cuniculus ENSOCUG00000017622 I 1.000
NOVA1 Monodelphis domestica ENSMODG00000001830 I 1.000
LOC722459 Macaca mulatta ENSMMUG00000004271 I 1.000
NOVA1 Loxodonta africana ENSLAFG00000006455 I 1.000
NOVA1 Vicugna pacos ENSVPAG00000007807 I 1.000
NOVA1 Canis familiaris ENSCAFG00000012492 I 1.000
NOVA1 Taeniopygia guttata ENSTGUG00000011799 I 1.000
NOVA1 Sorex araneus ENSSARG00000002599 I 1.000
NOVA1 Tupaia belangeri ENSTBEG00000009774 I 1.000
AAH74252 Xenopus laevis AAH74252 I 0.995
NOVA1 Homo sapiens ENSG00000139910 D 0.995
ENSG00000248163 Homo sapiens ENSG00000248163 I 0.995
ENSG00000249644 Homo sapiens ENSG00000249644 I 0.995
Nova1 Mus musculus ENSMUSG00000021047 I 0.995
Nova1 Rattus norvegicus ENSRNOG00000031440 I 0.995
nova1 Xenopus tropicalis ENSXETG00000010244 I 0.995
NOVA1 Pteropus vampyrus ENSPVAG00000002564 I 0.990
NOVA1 Choloepus hoffmanni ENSCHOG00000006617 I 0.944
nova1 Danio rerio ENSDARG00000020178 I 0.944
NOVA1 Takifugu rubripes ENSTRUG00000006617 I 0.944
NOVA1 Tetraodon nigroviridis ENSTNIG00000011634 I 0.944
NOVA1 Oryzias latipes ENSORLG00000000350 I 0.939
NOVA1 Gasterosteus aculeatus ENSGACG00000020175 I 0.939
NOVA1 Takifugu rubripes ENSTRUG00000016275 I 0.934
NOVA1 Felis catus ENSFCAG00000004226 I 0.933
NOVA2 Anolis carolinensis ENSACAG00000003724 I 0.919
NOVA2 Homo sapiens ENSG00000104967 D 0.914
Ame_R017219 Ailuropoda melanoleuca Ame_R017219 I 0.914
NOVA2 Pan troglodytes ENSPTRG00000011173 I 0.914
NOVA2 Felis catus ENSFCAG00000009509 I 0.914
NOVA2 Canis familiaris ENSCAFG00000004359 I 0.914
NOVA2 Oryctolagus cuniculus ENSOCUG00000022891 I 0.914
NOVA2 Sus scrofa ENSSSCG00000003095 I 0.914
NOVA2 Bos taurus ENSBTAG00000013157 I 0.914
Nova2 Rattus norvegicus ENSRNOG00000013847 I 0.909
Nova2 Mus musculus ENSMUSG00000030411 D 0.909
NOVA2 Myotis lucifugus ENSMLUG00000008039 I 0.904
LOC100402824 Callithrix jacchus ENSCJAG00000012121 I 0.904
NOVA2 Loxodonta africana ENSLAFG00000025917 I 0.904
nova2 Danio rerio ENSDARG00000017673 I 0.898
NOVA1 Meleagris gallopavo ENSMGAG00000012359 I 0.897
NOVA1 Erinaceus europaeus ENSEEUG00000013658 I 0.887
NOVA1 Gasterosteus aculeatus ENSGACG00000012628 I 0.883
AAH72959 Xenopus laevis AAH72959 I 0.846
NOVA2 Pteropus vampyrus ENSPVAG00000006169 I 0.843
nova2 Xenopus tropicalis ENSXETG00000019101 I 0.841
NOVA1 Echinops telfairi ENSETEG00000002159 I 0.800
estExt_GenewiseH_1.C_6000020 Branchiostoma floridae estExt_GenewiseH_1.C_6000020 I 0.788
XP_001175715.1 Strongylocentrotus purpuratus XP_001175715.1 N 0.706
XP_790705.1 Strongylocentrotus purpuratus XP_790705.1 N 0.706
XP_001176230.1 Strongylocentrotus purpuratus XP_001176230.1 N 0.706
XP_001175575.1 Strongylocentrotus purpuratus XP_001175575.1 N 0.706