CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KHSRP
(
Tarsius syrichta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTSYG00000011552
T19689_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000010601
KH
235
299
VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMV
ENSTSYP00000010601
KH
324
384
GIDVPVPRHVGVIVRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARII
ENSTSYP00000010601
KH
424
489
EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLI
Links
Other
KH
family RBPs
Other
Tarsius syrichta
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
KHSRP
Canis familiaris
ENSCAFG00000018667
I
0.974
FUBP1
Callithrix jacchus
ENSCJAG00000007062
I
0.747
FUBP1
Cavia porcellus
ENSCPOG00000002757
I
0.747
FUBP1
Erinaceus europaeus
ENSEEUG00000001287
N
0.747
FUBP1
Felis catus
ENSFCAG00000010330
N
0.747
ENSGGOG00000023069
Gorilla gorilla
ENSGGOG00000023069
N
0.845
FUBP1
Oryctolagus cuniculus
ENSOCUG00000002225
I
0.747