CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LmxM20.1370
(
Leishmania mexicana
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
LmxM20.1370
T24591_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LmxM20.1370
PUF
73
106
LCPRLRDVAVDVHGCHVLRTLVEACTAEQTEALI
LmxM20.1370
PUF
181
216
ELLPKLAALSMDAFANYMVQCTIEHSDRTTAAQYVV
LmxM20.1370
PUF
219
251
FTGNILQMSCNKHSSNVLEVVLRCCGEVPAVRR
LmxM20.1370
PUF
264
292
LKEVVGDLYGNFVVQALISVVTNPMEFKR
Links
Other
PUF
family RBPs
Other
Leishmania mexicana
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LbrM20_V2.5580
Leishmania braziliensis
LbrM20_V2.5580
N
0.932
LinJ20_V3.1410
Leishmania infantum
LinJ20_V3.1410
N
0.985
LinJ20_V3.1420
Leishmania infantum
LinJ20_V3.1420
N
0.985
LmjF20.1365
Leishmania major
LmjF20.1365
N
0.970
LmjF20.1370
Leishmania major
LmjF20.1370
N
0.970