CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LmjF20.1370
(
Leishmania major
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
LmjF20.1370
T24582_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LmjF20.1370
PUF
69
102
LCPRLRDVAVDVHGCHVLRTLVEACTAEQTDALI
LmjF20.1370
PUF
177
212
ELLPKLAALSMDAFANYMVQCAIEHSDRATAAQYVV
LmjF20.1370
PUF
215
247
FTGNILQMSCNKHSSNVLEVVLRCCGEVPAVRR
LmjF20.1370
PUF
260
288
LKEVVGDLYGNFVVQALIGVVTNPMEFKR
Links
Other
PUF
family RBPs
Other
Leishmania major
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LmjF20.1365
Leishmania major
LmjF20.1365
N
1.000
LinJ20_V3.1420
Leishmania infantum
LinJ20_V3.1420
N
0.985
LinJ20_V3.1410
Leishmania infantum
LinJ20_V3.1410
N
0.985
LmxM20.1370
Leishmania mexicana
LmxM20.1370
N
0.970
LbrM20_V2.5580
Leishmania braziliensis
LbrM20_V2.5580
N
0.932