fgenesh1_pm.00009_#_276 (Aspergillus carbonarius)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 fgenesh1_pm.00009_#_276 T25102_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.00009_#_276 PUF 594 627
fgenesh1_pm.00009_#_276 PUF 629 663
fgenesh1_pm.00009_#_276 PUF 669 700
fgenesh1_pm.00009_#_276 PUF 702 736
fgenesh1_pm.00009_#_276 PUF 739 772
fgenesh1_pm.00009_#_276 PUF 774 808
fgenesh1_pm.00009_#_276 PUF 810 844
fgenesh1_pm.00009_#_276 PUF 850 882

Links

Other PUF family RBPs
Other Aspergillus carbonarius RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.scaffold_10000040 Physcomitrella patens fgenesh1_pg.scaffold_10000040 N 0.000
fgenesh1_pg.scaffold_102000051 Physcomitrella patens fgenesh1_pg.scaffold_102000051 N 0.000
fgenesh1_pg.scaffold_132000015 Physcomitrella patens fgenesh1_pg.scaffold_132000015 N 0.000
fgenesh1_pg.scaffold_14000231 Physcomitrella patens fgenesh1_pg.scaffold_14000231 N 0.000
fgenesh1_pg.scaffold_157000047 Physcomitrella patens fgenesh1_pg.scaffold_157000047 N 0.000
fgenesh1_pg.scaffold_17000233 Physcomitrella patens fgenesh1_pg.scaffold_17000233 N 0.000
fgenesh1_pg.scaffold_192000022 Physcomitrella patens fgenesh1_pg.scaffold_192000022 N 0.000
fgenesh1_pg.scaffold_21000015 Physcomitrella patens fgenesh1_pg.scaffold_21000015 N 0.000
fgenesh1_pg.scaffold_262000019 Physcomitrella patens fgenesh1_pg.scaffold_262000019 N 0.000
fgenesh1_pg.scaffold_272000001 Physcomitrella patens fgenesh1_pg.scaffold_272000001 N 0.000
fgenesh1_pg.scaffold_340000028 Physcomitrella patens fgenesh1_pg.scaffold_340000028 N 0.000
fgenesh1_pg.scaffold_357000042 Physcomitrella patens fgenesh1_pg.scaffold_357000042 N 0.000
fgenesh1_pg.scaffold_36000076 Physcomitrella patens fgenesh1_pg.scaffold_36000076 N 0.000
fgenesh1_pg.scaffold_435000002 Physcomitrella patens fgenesh1_pg.scaffold_435000002 N 0.000
fgenesh1_pg.scaffold_80000116 Physcomitrella patens fgenesh1_pg.scaffold_80000116 N 0.000
fgenesh1_pg.scaffold_81000126 Physcomitrella patens fgenesh1_pg.scaffold_81000126 N 0.000
fgenesh1_pg.scaffold_84000013 Physcomitrella patens fgenesh1_pg.scaffold_84000013 N 0.000