fgenesh1_pg.scaffold_81000126 (Physcomitrella patens)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh1_pg.scaffold_81000126 T14126_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.scaffold_81000126 CCHC ZF 240 257

Links

Other CCHC ZF family RBPs
Other Physcomitrella patens RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.scaffold_170000020 Physcomitrella patens fgenesh1_pg.scaffold_170000020 N 0.833
fgenesh1_pg.scaffold_17000233 Physcomitrella patens fgenesh1_pg.scaffold_17000233 N 0.833
fgenesh1_pg.scaffold_262000019 Physcomitrella patens fgenesh1_pg.scaffold_262000019 N 0.778
fgenesh1_pg.scaffold_132000015 Physcomitrella patens fgenesh1_pg.scaffold_132000015 N 0.778
fgenesh1_pg.scaffold_272000001 Physcomitrella patens fgenesh1_pg.scaffold_272000001 N 0.722
fgenesh1_pg.scaffold_435000002 Physcomitrella patens fgenesh1_pg.scaffold_435000002 N 0.722
fgenesh1_pg.scaffold_80000116 Physcomitrella patens fgenesh1_pg.scaffold_80000116 N 0.722
fgenesh1_pg.scaffold_340000028 Physcomitrella patens fgenesh1_pg.scaffold_340000028 N 0.722
fgenesh1_pg.scaffold_21000015 Physcomitrella patens fgenesh1_pg.scaffold_21000015 N 0.722
fgenesh1_pg.scaffold_14000231 Physcomitrella patens fgenesh1_pg.scaffold_14000231 N 0.722
fgenesh1_pg.scaffold_157000047 Physcomitrella patens fgenesh1_pg.scaffold_157000047 N 0.722
fgenesh1_pg.scaffold_10000040 Physcomitrella patens fgenesh1_pg.scaffold_10000040 N 0.722
fgenesh1_pg.scaffold_84000013 Physcomitrella patens fgenesh1_pg.scaffold_84000013 N 0.722