CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Bos taurus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSBTAG00000017128
T26290_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000022768
RanBP ZF
663
693
KAGSSWQCDTCLLQNKVTDNKCVACQATKLL
ENSBTAP00000022768
RanBP ZF
730
758
VGTWDCDTCLVQNKPEAIKCVACETPKPG
ENSBTAP00000022768
RanBP ZF
800
829
PVGSWECPVCCVSNNAEDNKCVSCMSEKPG
ENSBTAP00000022768
RanBP ZF
859
888
PEGSWNCEVCLVQNKADSTKCIACETVKSH
Links
Other
RanBP ZF
family RBPs
Other
Bos taurus
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os11g35630
Oryza sativa
LOC_Os11g35630
N
0.000
YALI0E14388g1
Yarrowia lipolytica
YALI0E14388g1
N
0.000