CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBCK1
(
Tursiops truncatus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSTTRG00000005104
T26881_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000004793
RanBP ZF
196
221
GWQCPGCTFINKPTRPGCEMCCRARP
Links
Other
RanBP ZF
family RBPs
Other
Tursiops truncatus
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R014834
Ailuropoda melanoleuca
Ame_R014834
N
0.000
ENSACAG00000017733
Anolis carolinensis
ENSACAG00000017733
N
0.000
Q3T0B3_BOVIN
Bos taurus
ENSBTAG00000015263
N
0.000
CPSF7
Canis familiaris
ENSCAFG00000016152
N
0.000
LOC100387773
Callithrix jacchus
ENSCJAG00000019282
N
0.000
CPSF7
Cavia porcellus
ENSCPOG00000009980
N
0.000
CPSF7
Dasypus novemcinctus
ENSDNOG00000018517
N
0.000
CPSF7
Erinaceus europaeus
ENSEEUG00000005966
N
0.000
CPSF7
Echinops telfairi
ENSETEG00000003765
N
0.000
CPSF7
Felis catus
ENSFCAG00000013677
N
0.000
CPSF7
Homo sapiens
ENSG00000149532
N
0.000
CPSF7
Gallus gallus
ENSGALG00000013298
N
0.000
CPSF7
Loxodonta africana
ENSLAFG00000032084
N
0.000
CPSF7
Macropus eugenii
ENSMEUG00000002261
N
0.000
CPSF7
Meleagris gallopavo
ENSMGAG00000004876
N
0.000
CPSF7
Microcebus murinus
ENSMICG00000013788
N
0.000
CPSF7
Myotis lucifugus
ENSMLUG00000013278
N
0.000
CPSF7
Monodelphis domestica
ENSMODG00000020364
N
0.000
Cpsf7
Mus musculus
ENSMUSG00000034820
N
0.000
CPSF7
Oryctolagus cuniculus
ENSOCUG00000024726
N
0.000
CPSF7
Ochotona princeps
ENSOPRG00000008353
N
0.000
CPSF7
Procavia capensis
ENSPCAG00000009725
N
0.000
ENSPPYG00000003188
Pongo pygmaeus
ENSPPYG00000003188
N
0.000
CPSF7
Pan troglodytes
ENSPTRG00000003742
N
0.000
CPSF7
Pteropus vampyrus
ENSPVAG00000010675
N
0.000
CPSF7_RAT
Rattus norvegicus
ENSRNOG00000020668
N
0.000
CPSF7
Sus scrofa
ENSSSCG00000013083
N
0.000
CPSF7
Tupaia belangeri
ENSTBEG00000006496
N
0.000
CPSF7
Taeniopygia guttata
ENSTGUG00000006513
N
0.000
CPSF7
Tursiops truncatus
ENSTTRG00000011085
N
0.000