CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000017733
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000017733
T34753_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000017461
RRM
84
156
VYVGSFSWWTTDQQLIRIIRSVGVYDVVELKFAENRANGQSKGYAEVVGVSENSVHKLLELLPGSILNGDKMD
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSF7
Macropus eugenii
ENSMEUG00000002261
N
0.918
CPSF7
Monodelphis domestica
ENSMODG00000020364
N
0.918
CPSF7
Gallus gallus
ENSGALG00000013298
N
0.890
CPSF7
Taeniopygia guttata
ENSTGUG00000006513
N
0.890
CPSF7
Meleagris gallopavo
ENSMGAG00000004876
N
0.890
CPSF7
Tursiops truncatus
ENSTTRG00000011085
N
0.890
Cpsf7
Mus musculus
ENSMUSG00000034820
N
0.877
CPSF7
Oryctolagus cuniculus
ENSOCUG00000024726
N
0.877
CPSF7
Pan troglodytes
ENSPTRG00000003742
N
0.877
Ame_R014834
Ailuropoda melanoleuca
Ame_R014834
N
0.877
CPSF7
Sus scrofa
ENSSSCG00000013083
N
0.877
CPSF7_RAT
Rattus norvegicus
ENSRNOG00000020668
N
0.877
CPSF7
Myotis lucifugus
ENSMLUG00000013278
N
0.877
ENSPPYG00000003188
Pongo pygmaeus
ENSPPYG00000003188
N
0.877
CPSF7
Microcebus murinus
ENSMICG00000013788
N
0.877
CPSF7
Dasypus novemcinctus
ENSDNOG00000018517
N
0.877
LOC100059747
Equus caballus
ENSECAG00000018521
N
0.877
CPSF7
Cavia porcellus
ENSCPOG00000009980
N
0.877
LOC100387773
Callithrix jacchus
ENSCJAG00000019282
N
0.877
CPSF7
Canis familiaris
ENSCAFG00000016152
N
0.877
Q3T0B3_BOVIN
Bos taurus
ENSBTAG00000015263
N
0.877
CPSF7
Erinaceus europaeus
ENSEEUG00000005966
N
0.877
CPSF7
Felis catus
ENSFCAG00000013677
N
0.877
CPSF7
Homo sapiens
ENSG00000149532
N
0.877
CPSF7
Loxodonta africana
ENSLAFG00000032084
N
0.877
CPSF7
Echinops telfairi
ENSETEG00000003765
N
0.877
CPSF7
Pteropus vampyrus
ENSPVAG00000010675
N
0.863
CPSF7
Procavia capensis
ENSPCAG00000009725
N
0.781
CPSF7
Tupaia belangeri
ENSTBEG00000006496
N
0.767
CPSF7
Ochotona princeps
ENSOPRG00000008353
N
0.753