CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_001186443.1
(
Strongylocentrotus purpuratus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
XP_001186443.1
T27892_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_001186443.1
RanBP ZF
10
38
EANYWDCSVCTYRNRSEAFKCEMCDVRKG
Links
Other
RanBP ZF
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL008263
Aedes aegypti
AAEL008263
N
0.724
AGAP010288
Anopheles gambiae
AGAP010288
N
0.793
amel4_ncbi_hmm6926
Apis mellifera
amel4_ncbi_hmm6926
N
0.800
amel4_ncbi_hmm6926
Tribolium castaneum
amel4_ncbi_hmm6926
N
0.800
Ame_R009996
Ailuropoda melanoleuca
Ame_R009996
N
0.724
CPIJ008195
Culex quinquefasciatus
CPIJ008195
N
0.724
CpipJ_CPIJ008195
Culex pipiens
CpipJ_CPIJ008195
N
0.724
YAF2
Anolis carolinensis
ENSACAG00000003204
N
0.724
Q0VC56_BOVIN
Bos taurus
ENSBTAG00000015025
N
0.724
YAF2
Choloepus hoffmanni
ENSCHOG00000002266
N
0.724
LOC100410479
Callithrix jacchus
ENSCJAG00000017762
N
0.724
YAF2
Cavia porcellus
ENSCPOG00000015156
N
0.724
YAF2
Erinaceus europaeus
ENSEEUG00000004713
N
0.724
YAF2
Echinops telfairi
ENSETEG00000001634
N
0.724
YAF2
Homo sapiens
ENSG00000015153
N
0.724
Q5ZKC5_CHICK
Gallus gallus
ENSGALG00000009540
N
0.724
YAF2
Gorilla gorilla
ENSGGOG00000007230
N
0.724
YAF2
Macropus eugenii
ENSMEUG00000012378
N
0.724
YAF2
Macaca mulatta
ENSMMUG00000010868
N
0.724
YAF2
Monodelphis domestica
ENSMODG00000008906
N
0.724
Yaf2
Mus musculus
ENSMUSG00000022634
N
0.724
ENSPPYG00000004421
Pongo pygmaeus
ENSPPYG00000004421
N
0.724
YAF2
Pan troglodytes
ENSPTRG00000004837
N
0.724
YAF2
Pteropus vampyrus
ENSPVAG00000016833
N
0.724
Yaf2
Rattus norvegicus
ENSRNOG00000004773
N
0.724
YAF2
Spermophilus tridecemlineatus
ENSSTOG00000007224
N
0.724
YAF2
Taeniopygia guttata
ENSTGUG00000005817
N
0.724
YAF2
Tursiops truncatus
ENSTTRG00000001376
N
0.724
YAF2
Vicugna pacos
ENSVPAG00000012039
N
0.724
estExt_fgenesh1_pg.C_1000062
Nematostella vectensis
estExt_fgenesh1_pg.C_1000062
N
0.800
e_gw1.39.163.1
Capitella teleta
e_gw1.39.163.1
N
0.793
RYBP
Drosophila melanogaster
FBgn0034763
N
0.793
GA11466-RA
Drosophila pseudoobscura
FBgn0071517
N
0.793
GF11639
Drosophila ananassae
FBgn0088679
N
0.793
GG22783
Drosophila erecta
FBgn0114948
N
0.793
GH19772
Drosophila grimshawi
FBgn0127236
N
0.793
GI20311
Drosophila mojavensis
FBgn0143047
N
0.793
GL11369
Drosophila persimilis
FBgn0148978
N
0.793
GM15940
Drosophila sechellia
FBgn0170856
N
0.793
GD11693
Drosophila simulans
FBgn0183433
N
0.793
GJ22038
Drosophila virilis
FBgn0209152
N
0.793
GK21447
Drosophila willistoni
FBgn0223439
N
0.793
GE14012
Drosophila yakuba
FBgn0231642
N
0.793
fgenesh1_pg.C_scaffold_97000016
Daphnia pulex
fgenesh1_pg.C_scaffold_97000016
N
0.828
gw1.4.569.1
Trichoplax adhaerens
gw1.4.569.1
N
0.700
ISCW017896
Ixodes scapularis
ISCW017896
N
0.767
nasonia_NCBI_hmm137104
Nasonia vitripennis
nasonia_NCBI_hmm137104
N
0.800
PHUM359160
Pediculus humanus
PHUM359160
N
0.700
XP_001183014.1
Strongylocentrotus purpuratus
XP_001183014.1
N
1.000
XP_001183392.1
Strongylocentrotus purpuratus
XP_001183392.1
N
0.931
XP_780545.1
Strongylocentrotus purpuratus
XP_780545.1
N
0.931