CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BC1G_04453
(
Botrytis cinerea
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BC1G_04453
T28220_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BC1T_04453
RRM
139
209
VYIGCIPHGFYEAEMKAYFSQFGDILKIRLSRNRRTGASKHYAWIQFASRGVAEIVSKTMDKYLLFNHILK
Links
Other
RRM
family RBPs
Other
Botrytis cinerea
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCAFG00000017180
Canis familiaris
ENSCAFG00000017180
N
0.000
ENSCAFG00000017240
Canis familiaris
ENSCAFG00000017240
N
0.000
ENSCAFG00000017467
Canis familiaris
ENSCAFG00000017467
I
0.000
ENSCPOG00000020972
Cavia porcellus
ENSCPOG00000020972
N
0.000
ENSMMUG00000017582
Macaca mulatta
ENSMMUG00000017582
N
0.000