CpipJ_CPIJ003074 (Culex pipiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CpipJ_CPIJ003074 T28883_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbp1
M336_0.6 		Drosophila melanogaster Sequence logo not available AUCYNNA SELEX
Cook et al.(2011)
804_7664738.1 		0.909
Rbp1
M335_0.6 		Drosophila melanogaster Sequence logo not available DCADCUUUA SELEX
Cook et al.(2011)
804_7664738 		0.909
Rbp1
M056_0.6 		Drosophila melanogaster WCAACRR RNAcompete
Ray et al.(2013)
RNCMPT00058 		0.909
Rbp1-like
M121_0.6 		Drosophila melanogaster AUCADCR RNAcompete
Ray et al.(2013)
RNCMPT00127 		0.894
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ003074-RA RRM 13 78

Links

Other RRM family RBPs
Other Culex pipiens RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PITG_05996 Phytophthora infestans PITG_05996 N 0.000
PITG_10643 Phytophthora infestans PITG_10643 N 0.000
PITG_18407 Phytophthora infestans PITG_18407 N 0.000
s_438503 Phytophthora sojae s_438503 N 0.000
s_442997 Phytophthora sojae s_442997 N 0.000
s_447230 Phytophthora sojae s_447230 N 0.000
s_452713 Phytophthora sojae s_452713 N 0.000
s_454998 Phytophthora sojae s_454998 N 0.000
s_457845 Phytophthora sojae s_457845 N 0.000
s_461461 Phytophthora sojae s_461461 N 0.000
s_471879 Phytophthora sojae s_471879 N 0.000
s_474215 Phytophthora sojae s_474215 N 0.000