CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_00727
(
Microsporum canis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MCYG_00727
T29676_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_00727T0
RRM
33
86
VSLSFNKQDIEEHFGSHGTGKITEIKLMQGFGFIEYEDAMDAKDVVPGEDTSVV
MCYG_00727T0
RRM
166
228
ITGLPETSWQDLKDFARQSGLDVVYSETRDRDGKGFVEFENGNDLRTAVEKLDGTDFKGSRVT
Links
Other
RRM
family RBPs
Other
Microsporum canis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_00086
Histoplasma capsulatum
HCAG_00086
N
0.702
MGYG_01236
Microsporum gypseum
MGYG_01236
N
0.941
TEQG_05050
Trichophyton equinum
TEQG_05050
N
0.820
TESG_02526
Trichophyton tonsurans
TESG_02526
N
0.862