CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_02526
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_02526
T31153_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_02526T0
RRM
30
86
LPPVNKQDIEEHFGSHGTGKITEIKLMQGFGFIEYEDAMDAKDVVPDGTDFKGERLT
TESG_02526T0
RRM
120
182
ITGLPETSWQDLKDFARQSGLDVVYSETRDRDGKGFVEFENGNDLRTAVEKLDGTDFKGSRVT
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TEQG_05050
Trichophyton equinum
TEQG_05050
N
0.906
MCYG_00727
Microsporum canis
MCYG_00727
N
0.862
MGYG_01236
Microsporum gypseum
MGYG_01236
N
0.855
HCAG_00086
Histoplasma capsulatum
HCAG_00086
N
0.805
CIMG_03560
Coccidioides immitis
CIMG_03560
N
0.790
ACLA_037960
Aspergillus clavatus
CADACLAG00003195
N
0.773
fgenesh1_pm.00168_#_248
Aspergillus carbonarius
fgenesh1_pm.00168_#_248
N
0.760
An16g03890
Aspergillus niger
CADANGAG00012860
N
0.760
ANIA_04978
Aspergillus nidulans
CADANIAG00005417
N
0.746
CPSG_02395
Coccidioides posadasii
CPSG_02395
N
0.744
AO090003000544
Aspergillus oryzae
CADAORAG00001164
N
0.744
AFLA_032760
Aspergillus flavus
CADAFLAG00002651
N
0.725
Pc13g10700
Penicillium chrysogenum
Pc13g10700
N
0.711
GLRG_08760
Colletotrichum graminicola
GLRG_08760
N
0.708
BC1G_09648
Botrytis cinerea
BC1G_09648
N
0.705
SS1G_14437
Sclerotinia sclerotiorum
SS1G_14437
N
0.705
NCU07069
Neurospora crassa
NCU07069
N
0.702
estExt_fgenesh3_kg.C_60024
Neurospora discreta
estExt_fgenesh3_kg.C_60024
N
0.702
estExt_fgenesh2_kg.C_20245
Neurospora tetrasperma
estExt_fgenesh2_kg.C_20245
N
0.702