CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PABG_02641
(
Paracoccidioides brasiliensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PABG_02641
T29940_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PABG_02641T0
RRM
59
126
HIGNLSFEAAQADISELFKECQVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALTFQGTSLQGRNIR
Links
Other
RRM
family RBPs
Other
Paracoccidioides brasiliensis
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_03225
Arthroderma benhamiae
ARB_03225
N
0.824
BDBG_02754
Blastomyces dermatitidis
BDBG_02754
N
0.868
ACLA_075320
Aspergillus clavatus
CADACLAG00006833
N
0.750
AFLA_003440
Aspergillus flavus
CADAFLAG00010410
N
0.706
AFUA_2G16400
Aspergillus fumigatus
CADAFUAG00004230
N
0.706
An15g06790
Aspergillus niger
CADANGAG00012358
N
0.721
ANIA_07350
Aspergillus nidulans
CADANIAG00000083
N
0.721
AO090102000222
Aspergillus oryzae
CADAORAG00009578
N
0.706
ATEG_02298
Aspergillus terreus
CADATEAG00000182
N
0.735
NFIA_091670
Neosartorya fischeri
CADNFIAG00006889
N
0.735
CIMG_09493
Coccidioides immitis
CIMG_09493
N
0.868
CPSG_04053
Coccidioides posadasii
CPSG_04053
N
0.868
fgenesh1_pg.00815_#_18
Aspergillus carbonarius
fgenesh1_pg.00815_#_18
N
0.706
HCAG_06478
Histoplasma capsulatum
HCAG_06478
N
0.897
MCYG_03836
Microsporum canis
MCYG_03836
N
0.838
MGYG_07815
Microsporum gypseum
MGYG_07815
N
0.838
Pc21g01490
Penicillium chrysogenum
Pc21g01490
N
0.710
PMAA_034530
Penicillium marneffei
PMAA_034530
N
0.750
TEQG_03246
Trichophyton equinum
TEQG_03246
N
0.824
TERG_05285
Trichophyton rubrum
TERG_05285
N
0.824
TESG_04321
Trichophyton tonsurans
TESG_04321
N
0.824
TRV_02454
Trichophyton verrucosum
TRV_02454
N
0.809
UREG_04821
Uncinocarpus reesii
UREG_04821
N
0.868